
In the Great Lakes, harmful algal blooms (HABs) are dominated by cyanobacteria, commonly called blue-green algae, that grow rapidly when conditions warrant (warm water temperatures and excess nutrients). Cyanobacteria are ancient organisms that have been producing oxygen through photosynthesis for billions of years, helping shape Earth’s atmosphere. Today, these blooms can form dense surface scums and sometimes produce toxins that pose risks to people, pets, wildlife, and drinking water supplies.
HABs primarily occur in several areas across the Great Lakes, including western Lake Erie, Saginaw Bay in Lake Huron, and Green Bay in Lake Michigan. They reduce water clarity, disrupt recreational activities, and affect local ecosystems. While HABs are a concern throughout the region, western Lake Erie experiences some of the largest and most intense cyanobacterial blooms, making it a focal point for extensive monitoring for research and forecasting. These blooms are often dominated by the Microcystis algae, a type of cyanobacteria capable of producing toxins known as microcystins.
Each year, researchers at NOAA’s Great Lakes Environmental Research Laboratory (GLERL) and the University of Michigan’s Cooperative Institute for Great Lakes Research (CIGLR) monitor and track Great Lakes HABs using field observations and advanced technologies. Together, these efforts help scientists better understand bloom development, toxin levels, and potential impacts on communities, improving our ability to warn people about bloom conditions.
What the 2026 Lake Erie Seasonal HAB Forecast Tells Us
According to NOAA’s National Centers for Coastal Ocean Science (NCCOS) early season HAB outlook released on June 25, western Lake Erie was forecast to experience a moderate cyanobacterial harmful algal bloom (HAB) during the 2026 season (roughly July to October).

In western Lake Erie, bloom severity is largely driven by the amount of phosphorus entering the lake from the Maumee River watershed during the spring and early summer. NOAA measures bloom severity using an index that reflects the amount of cyanobacterial biomass, or blue-green algae, present during the bloom’s peak 30-day period, which generally occurs in August but can vary from year to year. A severity index between 3 and 4.5 indicates a moderate bloom, while values above 5 indicate a severe bloom. This season’s bloom was forecast to fall between 3 and 4.5, comparable to the blooms observed in 2020 and 2023 but in contrast to 2011 when extreme bloom severity reached a record-setting index of 10. Although an early April rainfall event caused phosphorus loading in western Lake Erie, bloom severity ultimately depends on weather conditions and rainfall through July.
Bloom size tells only part of the story. Because toxin levels can vary independently of bloom conditions, researchers are developing forecasts for both bloom severity and toxicity.
Tracking Harmful Algal Blooms Across the Great Lakes
Predicting the season’s bloom severity is only part of the challenge in managing impacts from HABs. Throughout the season, scientists from GLERL and CIGLR monitor bloom development, movement, and toxicity across the Great Lakes to better understand bloom dynamics, detect emerging HAB activity, and provide timely information to resource managers, water treatment operators, and the public.
From late April through October, researchers conduct regular monitoring cruises in western Lake Erie and Saginaw Bay, collecting water samples that are analyzed for indicators such as chlorophyll, phosphorus, and microcystin concentrations. Researchers also rely on a network of observations including buoys, satellite and aircraft-based remote sensing datasets, autonomous vehicles, and Environmental Sample Processors (ESPs) to track bloom conditions across the basin, including areas such as Green Bay.
Together, these observations provide near real-time information on bloom location, intensity, and toxicity. The data help scientists evaluate forecast performance, improve predictive models, and identify changes in bloom behavior as environmental conditions shift. By combining field observations with advanced monitoring technologies, researchers can provide more accurate and actionable information to support decision-making throughout the Great Lakes region. These observations are being used to develop new forecasting tools designed to predict toxin concentrations.
Recent research also demonstrated the importance of monitoring HAB conditions across areas of the lake. A study led by CIGLR and NOAA GLERL researchers examined how water from the Detroit and Maumee rivers interacts in western Lake Erie, creating distinct environmental conditions that influence bloom development. “We expected to find a gradient between the Detroit and Maumee river inflows, but I was surprised by how much the transition zones shifted from month to month and how distinct they were,” said CIGLR’s Jasmine Mancuso, lead author of the study. CIGLR researchers explain the study and its findings in a recent blog post, highlighting how observations across this gradient provide a more complete picture of the factors that shape HABs and can improve future bloom forecasts.




Forecasting Bloom Toxin Levels
As monitoring improves, researchers are working to better predict not only where blooms will occur, but also how toxin levels change. Because bloom size and toxin levels are not always closely linked, forecasting toxins has become an important area of harmful algal bloom research.
NOAA researchers have developed an experimental five-day toxin forecast system that predicts the probability of exceeding the recreational public health advisory level for microcystins in western Lake Erie. The system combines weekly measurements of microcystins with data on bloom conditions, weather, and lake circulation to estimate where and when elevated microcystin levels may occur. NOAA GLERL is currently working with partners at NCCOS to move the system into operational use, timely information about toxin risks in Lake Erie.
Testing with ten years of historical Lake Erie data shows that it performs well in identifying areas of increased toxin risk, including near drinking water intakes, within bloom-affected regions, and across the western basin. This long-term record was essential for testing the forecast across a range of toxin levels. “It is a relatively rare event for microcystin levels to exceed the public health advisory level,” said Mark Rowe, Ph.D., a research physical scientist at NOAA GLERL. “Only 3% of observations in the ten-year database exceeded that level. It was necessary to have a large database of observations, including the rare exceedances, to calibrate the statistical models that underpin the forecast, showing the value of long-term monitoring programs.”
By focusing on the likelihood of elevated toxins rather than bloom presence alone, these forecasts can help water treatment managers, public health officials, and coastal communities make informed decisions during the bloom season. A public version of the forecast is planned, providing earlier and more accurate information about potential toxin exposure.
Understanding the Health Risks of Harmful Algal Blooms
Some cyanobacteria that form harmful algal blooms produce toxins that can affect humans and animals. In Lake Erie, Microcystis blooms can produce microcystin, a toxin that affects the liver and contaminates drinking water sources when blooms occur near water intakes.


People can be exposed to HAB toxins through skin contact, accidental ingestion of contaminated water, or inhalation of water droplets and aerosols. Exposure can cause symptoms such as skin irritation, coughing, nausea, vomiting, and diarrhea, with more severe health effects possible in some cases.
Pets – particularly dogs – face an elevated risk when they swim in affected water and groom themselves after. Staying aware of local conditions and advisories can reduce exposure risks for both people and pets.
New research also shows that Lake Erie cyanobacteria blooms produce a mix of naturally occurring compounds that change over the course of the season. Instead of being dominated by a single toxin, blooms may shift through phases where different cyanobacteria compounds become more common. This variability adds another layer of complexity to understanding bloom impacts and highlights the importance of looking at all toxins when assessing potential risks. “These cyanobacteria are extraordinary chemical factories; they produce an astonishing diversity of chemical compounds, and we’re only just beginning to identify and understand them all. But there is some evidence that suggests that this mixture of compounds may affect human health in novel ways,” said Greg Dick, Ph.D., Director of CIGLR and senior author on the study. “CIGLR and GLERL scientists are partnering with colleagues around the region, including the Great Lakes Center for Freshwaters and Human Health, to better understand the impacts of blooms on human health and the risks they pose to people that live, work, and play in and near the lakes.”
Looking Ahead
Although 2026 is projected to be a moderate bloom year, conditions can change throughout the summer. GLERL and CIGLR scientists continue monitoring Lake Erie and other Great Lakes HAB blooms throughout the season, providing data for forecasts and water resource management. While western Lake Erie remains the primary focus of seasonal forecasting because of its large, recurring blooms, monitoring HABs in Saginaw Bay and Green Bay helps reduce HAB risks across the Great Lakes basin.
Together, these efforts support research, forecasting, and public health initiatives that help communities safely enjoy Great Lakes waters.

Additional Resources
- Harmful Algal Bloom Forecasting: NOAA’s National Centers for Coastal Ocean Science (NCCOS) HAB forecasts and partner-developed regional forecasts provide early warnings about bloom conditions, helping communities, managers, and public health officials prepare for potential impacts
- Lake Erie Harmful Algal Bloom Forecast: NOAA provides forecasts for seasonal blooms of cyanobacteria (blue-green algae) in Lake Erie, typically from July to October when warmer water creates favorable bloom conditions.
- Great Lakes Harmful Algal Blooms (HABs) and Hypoxia Program: A collaboration between GLERL and CIGLR scientists, uses satellite imagery, remote sensing, buoys, monitoring programs, and genetic techniques to understand and predict HABs and hypoxia across the Great Lakes. The data collected improves forecast models that help stakeholders, including drinking water managers, make informed decisions to protect ecosystem health and reduce risks associated with recreation, consumption, and water treatment.
- NOAA detects harmful toxin growing in Lake Erie earlier than past years: In 2025, NOAA detected levels of the harmful toxin, microcystin, in Lake Erie weeks earlier than it is usually detected in routine water tests.
- Cooperative Institute for Great Lakes Research (CIGLR) Harmful Algal Blooms (HABs) Program: This CIGLR resource highlights research on harmful algal blooms (HABs), including efforts to understand bloom drivers, improve monitoring and forecasting tools, and reduce impacts on Great Lakes ecosystems and communities.
- Toxic algae blooms are lasting longer in Lake Erie − why that’s a worry for people and pets: This article explores how longer-lasting harmful algal blooms in Lake Erie can increase risks for people, pets, and ecosystems, while explaining the science behind changing bloom conditions and toxin concerns.
















































